BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016B05SP1|AL426957
(537 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig484 824 0.0
>3x_Contig484
Length = 1849
Score = 824 bits (412), Expect = 0.0
Identities = 437/450 (97%)
Strand = Plus / Plus
Query: 1 aaatgccgtactcttttctaaattgatgataatagcacagaattcccaatacaggatcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1400 aaatgccgtactcttttctaaattgatgataatagcacagaattcccaatacaggatcac 1459
Query: 61 caagcctactcgccaggttgcatgcatcacgtttathaatataagtnagtaaataaggtt 120
|||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 1460 caagcctactcgccaggttgcatgcatcacgtttattaatataagttagtaaataaggtt 1519
Query: 121 tcacctcagctgtcacatagtataagawaaaaatgcatacatgtaaaccctcagattcaa 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1520 tcacctcagctgtcacatagtataagataaaaatgcatacatgtaaaccctcagattcaa 1579
Query: 181 tcatccacaagttccagttataatatwhncgcagtatgataccatccaactgattgaact 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1580 tcatccacaagttccagttataatattttcgcagtatgataccatccaactgattgaact 1639
Query: 241 gcctggaaggaacccaagccgtgttggcagtcacgcaatcaaaccttgttggttgctttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1640 gcctggaaggaacccaagccgtgttggcagtcacgcaatcaaaccttgttggttgctttc 1699
Query: 301 ttttgtttccagaaggattatgttcatactgattatngattttmcaacaatggaactgga 360
|||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 1700 ttttgtttccagaaggattatgttcatactgattattgatttttcaacaatggaactgga 1759
Query: 361 aaatgctaaagattgtcgacaacagttacaagagatgaagcgattgtrataaaagaagcg 420
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1760 aaatgctaaagattgtcgacaacagttacaagagatgaagcgattgtgataaaagaaagc 1819
Query: 421 gtcatcaaattatatacgagacttccatca 450
||||||| ||||||||||||||||||||||
Sbjct: 1820 gtcatcanattatatacgagacttccatca 1849
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3177
Number of Sequences: 1807
Number of extensions: 3177
Number of successful extensions: 69
Number of sequences better than 1.0e-20: 1
length of query: 537
length of database: 10,358,551
effective HSP length: 16
effective length of query: 521
effective length of database: 10,329,639
effective search space: 5381741919
effective search space used: 5381741919
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)